Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC22.97■■□□□ 1.27
SBNO1A3KN83 WT1-AS_2.1-201ENST00000613208 137 ntBASIC22.97■■□□□ 1.27
SBNO1A3KN83 AC133963.1-201ENST00000504166 1679 ntBASIC22.97■■□□□ 1.27
SBNO1A3KN83 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC22.97■■□□□ 1.27
SBNO1A3KN83 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SBNO1A3KN83 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SBNO1A3KN83 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 NARF-206ENST00000457415 1668 ntTSL 5 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 AL355312.1-201ENST00000407115 2176 ntBASIC22.96■■□□□ 1.27
SBNO1A3KN83 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 HNRNPA3P1-201ENST00000401429 1139 ntBASIC22.96■■□□□ 1.27
SBNO1A3KN83 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 HNRNPA3P5-201ENST00000455201 833 ntBASIC22.96■■□□□ 1.27
SBNO1A3KN83 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SBNO1A3KN83 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SBNO1A3KN83 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
SBNO1A3KN83 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC22.95■■□□□ 1.27
SBNO1A3KN83 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
SBNO1A3KN83 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
SBNO1A3KN83 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
SBNO1A3KN83 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.95■■□□□ 1.26
SBNO1A3KN83 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC22.95■■□□□ 1.26
SBNO1A3KN83 KRT17P7-201ENST00000451704 1104 ntBASIC22.95■■□□□ 1.26
SBNO1A3KN83 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC22.95■■□□□ 1.26
SBNO1A3KN83 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
SBNO1A3KN83 MPI-209ENST00000564003 1195 ntTSL 2 BASIC22.95■■□□□ 1.26
SBNO1A3KN83 TP53TG3HP-202ENST00000569755 579 ntBASIC22.95■■□□□ 1.26
SBNO1A3KN83 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.95■■□□□ 1.26
SBNO1A3KN83 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC22.95■■□□□ 1.26
SBNO1A3KN83 TOP3BP1-201ENST00000420768 1380 ntBASIC22.95■■□□□ 1.26
SBNO1A3KN83 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SBNO1A3KN83 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SBNO1A3KN83 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SBNO1A3KN83 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC22.94■■□□□ 1.26
SBNO1A3KN83 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SBNO1A3KN83 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
SBNO1A3KN83 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC22.94■■□□□ 1.26
SBNO1A3KN83 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC22.94■■□□□ 1.26
SBNO1A3KN83 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC22.94■■□□□ 1.26
SBNO1A3KN83 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.94■■□□□ 1.26
SBNO1A3KN83 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
SBNO1A3KN83 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC22.94■■□□□ 1.26
SBNO1A3KN83 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.94■■□□□ 1.26
SBNO1A3KN83 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC22.94■■□□□ 1.26
SBNO1A3KN83 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.94■■□□□ 1.26
SBNO1A3KN83 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SBNO1A3KN83 AP3S2-216ENST00000617003 1561 ntBASIC22.93■■□□□ 1.26
SBNO1A3KN83 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SBNO1A3KN83 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC22.93■■□□□ 1.26
SBNO1A3KN83 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC22.93■■□□□ 1.26
SBNO1A3KN83 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC22.93■■□□□ 1.26
SBNO1A3KN83 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC22.93■■□□□ 1.26
SBNO1A3KN83 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SBNO1A3KN83 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.93■■□□□ 1.26
SBNO1A3KN83 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SBNO1A3KN83 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.93■■□□□ 1.26
SBNO1A3KN83 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.93■■□□□ 1.26
SBNO1A3KN83 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
SBNO1A3KN83 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC22.93■■□□□ 1.26
SBNO1A3KN83 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SBNO1A3KN83 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.93■■□□□ 1.26
SBNO1A3KN83 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SBNO1A3KN83 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.92■■□□□ 1.26
SBNO1A3KN83 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SBNO1A3KN83 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC22.92■■□□□ 1.26
SBNO1A3KN83 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
SBNO1A3KN83 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SBNO1A3KN83 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
SBNO1A3KN83 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SBNO1A3KN83 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
SBNO1A3KN83 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC22.92■■□□□ 1.26
SBNO1A3KN83 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC22.92■■□□□ 1.26
SBNO1A3KN83 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC22.92■■□□□ 1.26
SBNO1A3KN83 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.92■■□□□ 1.26
SBNO1A3KN83 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
SBNO1A3KN83 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.92■■□□□ 1.26
SBNO1A3KN83 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SBNO1A3KN83 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
SBNO1A3KN83 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms