Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV9S1A1TA0A576 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV9S1A1TA0A576 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
TCRBV9S1A1TA0A576 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV9S1A1TA0A576 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV9S1A1TA0A576 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.27■□□□□ 0.35
TCRBV9S1A1TA0A576 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV9S1A1TA0A576 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.27■□□□□ 0.35
TCRBV9S1A1TA0A576 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV9S1A1TA0A576 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV9S1A1TA0A576 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TCRBV9S1A1TA0A576 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 VENTXP7-201ENST00000475503 772 ntBASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 RN7SL850P-201ENST00000579959 291 ntBASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
TCRBV9S1A1TA0A576 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 AC008894.3-201ENST00000624324 3103 ntBASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 TP73-AS1-210ENST00000637775 1455 ntBASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 TUBB8P12-201ENST00000308911 1335 ntBASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 TUBB7P-202ENST00000428444 1305 ntBASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 TUBB8P7-204ENST00000567960 1332 ntBASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 AL391256.1-201ENST00000443260 1855 ntBASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 CHCHD2P8-201ENST00000429873 447 ntBASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 NTF6B-201ENST00000591913 560 ntBASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 AC092364.2-201ENST00000596710 2692 ntBASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV9S1A1TA0A576 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms