Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 LAGE3P1-201ENST00000425356 484 ntBASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 OR7E14P-202ENST00000530490 1290 ntBASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AL139424.1-201ENST00000607572 797 ntBASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 GPR89P-201ENST00000407924 1495 ntBASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC004706.3-202ENST00000621574 984 ntBASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC107918.4-202ENST00000641623 219 ntBASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AL590787.1-201ENST00000568856 1315 ntBASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 MIR574-201ENST00000385209 96 ntBASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PMS2P1-201ENST00000431037 1228 ntBASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC012640.2-201ENST00000561606 901 ntBASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFSF12-TNFSF13A0A0A6YY99 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms