Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 GALC-206ENST00000544807 2528 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 ALOX12P2-203ENST00000570921 1945 ntBASIC8.84□□□□□ -1
LINC01558Q9Y6Z2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
LINC01558Q9Y6Z2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC8.84□□□□□ -1
LINC01558Q9Y6Z2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
LINC01558Q9Y6Z2 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -1
LINC01558Q9Y6Z2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 MBLAC2-202ENST00000514906 1936 ntBASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms