Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 U1.21-201ENST00000580816 167 ntBASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 AC027307.2-201ENST00000591252 911 ntBASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 AL031055.1-201ENST00000606362 631 ntBASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 MIR346-201ENST00000362234 95 ntBASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 AP005018.1-201ENST00000525475 301 ntBASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HCFC2Q9Y5Z7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 CRB3P1-201ENST00000449338 276 ntBASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC2Q9Y5Z7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 AC241585.1-201ENST00000433527 519 ntBASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 AC004890.2-204ENST00000481968 304 ntBASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 MIR4453-201ENST00000584019 89 ntBASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.77■□□□□ 0.44
HCFC2Q9Y5Z7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms