Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 AC092865.7-201ENST00000641832 219 ntBASIC16.26■□□□□ 0.19
AP4S1Q9Y587 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 AC023824.1-201ENST00000562945 2975 ntBASIC16.26■□□□□ 0.19
AP4S1Q9Y587 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.26■□□□□ 0.19
AP4S1Q9Y587 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 REXO1L10P-201ENST00000615707 1290 ntBASIC16.25■□□□□ 0.19
AP4S1Q9Y587 AC009154.2-201ENST00000621177 724 ntBASIC16.25■□□□□ 0.19
AP4S1Q9Y587 REXO1L12P-201ENST00000622156 912 ntBASIC16.25■□□□□ 0.19
AP4S1Q9Y587 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 AC104640.1-201ENST00000562617 2109 ntBASIC16.25■□□□□ 0.19
AP4S1Q9Y587 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
AP4S1Q9Y587 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms