Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 MIR3687-1-201ENST00000614492 61 ntBASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN1Q9UMX0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
UBQLN1Q9UMX0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN1Q9UMX0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.33■□□□□ 0.53
UBQLN1Q9UMX0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
UBQLN1Q9UMX0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN1Q9UMX0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.53
UBQLN1Q9UMX0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN1Q9UMX0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.33■□□□□ 0.53
UBQLN1Q9UMX0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
UBQLN1Q9UMX0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 AL023806.1-201ENST00000603994 1649 ntBASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 AC074386.1-202ENST00000463561 864 ntBASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 AC124947.2-201ENST00000547118 1133 ntBASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 AC005412.3-201ENST00000580309 715 ntBASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 AC139530.3-201ENST00000620344 690 ntBASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 AC141586.5-201ENST00000624546 2050 ntBASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN1Q9UMX0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms