Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.71■□□□□ 0.75
USP25Q9UHP3 AC103564.2-201ENST00000432853 1299 ntBASIC19.71■□□□□ 0.75
USP25Q9UHP3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 KRT8P26-201ENST00000534154 1276 ntBASIC19.71■□□□□ 0.75
USP25Q9UHP3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
USP25Q9UHP3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
USP25Q9UHP3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.71■□□□□ 0.75
USP25Q9UHP3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.71■□□□□ 0.75
USP25Q9UHP3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 TMPOP1-202ENST00000424642 1267 ntBASIC19.7■□□□□ 0.74
USP25Q9UHP3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 AC246785.2-201ENST00000432512 513 ntBASIC19.7■□□□□ 0.74
USP25Q9UHP3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 AC011840.4-201ENST00000578471 627 ntBASIC19.7■□□□□ 0.74
USP25Q9UHP3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 AC007950.2-201ENST00000615045 2347 ntBASIC19.7■□□□□ 0.74
USP25Q9UHP3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 AC092053.1-201ENST00000605787 1936 ntBASIC19.7■□□□□ 0.74
USP25Q9UHP3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
USP25Q9UHP3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP25Q9UHP3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP25Q9UHP3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP25Q9UHP3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP25Q9UHP3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP25Q9UHP3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP25Q9UHP3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP25Q9UHP3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP25Q9UHP3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 IGHV3-41-201ENST00000613121 348 ntBASIC19.69■□□□□ 0.74
USP25Q9UHP3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP25Q9UHP3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP25Q9UHP3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP25Q9UHP3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.69■□□□□ 0.74
USP25Q9UHP3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms