Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.22■□□□□ 0.51
CXXC1Q9P0U4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 INE1-201ENST00000456273 945 ntBASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 AC140912.1-201ENST00000577171 1054 ntBASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXXC1Q9P0U4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
CXXC1Q9P0U4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
CXXC1Q9P0U4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 DGCR5-201ENST00000399539 862 ntBASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 RPS2P32-201ENST00000439199 892 ntBASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 MIR3909-201ENST00000579518 119 ntBASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CXXC1Q9P0U4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 FLJ13224-201ENST00000313737 1514 ntBASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 AC079776.1-201ENST00000401540 1152 ntBASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 MIR1909-201ENST00000411312 80 ntBASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 AL353779.1-201ENST00000434793 351 ntBASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 AC017083.2-201ENST00000608069 979 ntBASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 AL844908.2-201ENST00000609461 460 ntBASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 AC004840.1-201ENST00000636359 365 ntBASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CXXC1Q9P0U4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms