Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HACD3Q9P035 AP001094.4-201ENST00000579008 2176 ntBASIC17.39■□□□□ 0.37
HACD3Q9P035 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.39■□□□□ 0.37
HACD3Q9P035 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.39■□□□□ 0.37
HACD3Q9P035 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HACD3Q9P035 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HACD3Q9P035 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.39■□□□□ 0.37
HACD3Q9P035 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.38■□□□□ 0.37
HACD3Q9P035 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 AC093525.9-201ENST00000624961 1746 ntBASIC17.38■□□□□ 0.37
HACD3Q9P035 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.38■□□□□ 0.37
HACD3Q9P035 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.38■□□□□ 0.37
HACD3Q9P035 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 AC084018.2-201ENST00000613093 2607 ntBASIC17.38■□□□□ 0.37
HACD3Q9P035 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
HACD3Q9P035 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HACD3Q9P035 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HACD3Q9P035 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HACD3Q9P035 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.38■□□□□ 0.37
HACD3Q9P035 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HACD3Q9P035 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.38■□□□□ 0.37
HACD3Q9P035 AL450487.1-201ENST00000426799 995 ntBASIC17.38■□□□□ 0.37
HACD3Q9P035 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.38■□□□□ 0.37
HACD3Q9P035 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.38■□□□□ 0.37
HACD3Q9P035 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.38■□□□□ 0.37
HACD3Q9P035 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.38■□□□□ 0.37
HACD3Q9P035 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HACD3Q9P035 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HACD3Q9P035 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.38■□□□□ 0.37
HACD3Q9P035 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
HACD3Q9P035 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HACD3Q9P035 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.38■□□□□ 0.37
HACD3Q9P035 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.37■□□□□ 0.37
HACD3Q9P035 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HACD3Q9P035 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HACD3Q9P035 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.37■□□□□ 0.37
HACD3Q9P035 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
HACD3Q9P035 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.37■□□□□ 0.37
HACD3Q9P035 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
HACD3Q9P035 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 BX005266.1-201ENST00000473402 457 ntBASIC17.37■□□□□ 0.37
HACD3Q9P035 UNC93B7-201ENST00000509439 705 ntBASIC17.37■□□□□ 0.37
HACD3Q9P035 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.37■□□□□ 0.37
HACD3Q9P035 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.37■□□□□ 0.37
HACD3Q9P035 AF238378.1-201ENST00000526806 358 ntBASIC17.37■□□□□ 0.37
HACD3Q9P035 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.37■□□□□ 0.37
HACD3Q9P035 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HACD3Q9P035 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HACD3Q9P035 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.37■□□□□ 0.37
HACD3Q9P035 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.37■□□□□ 0.37
HACD3Q9P035 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HACD3Q9P035 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HACD3Q9P035 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.37■□□□□ 0.37
HACD3Q9P035 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HACD3Q9P035 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
HACD3Q9P035 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HACD3Q9P035 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
HACD3Q9P035 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.36■□□□□ 0.37
HACD3Q9P035 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HACD3Q9P035 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HACD3Q9P035 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.36■□□□□ 0.37
HACD3Q9P035 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.36■□□□□ 0.37
HACD3Q9P035 AC080080.1-201ENST00000625121 2420 ntBASIC17.36■□□□□ 0.37
HACD3Q9P035 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 AC012313.1-201ENST00000593393 3059 ntBASIC17.36■□□□□ 0.37
HACD3Q9P035 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.36■□□□□ 0.37
HACD3Q9P035 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
HACD3Q9P035 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms