Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PAWRP1-201ENST00000451083 565 ntBASIC18.28■□□□□ 0.52
CISHQ9NSE2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 AC092910.1-201ENST00000482027 1129 ntBASIC18.28■□□□□ 0.52
CISHQ9NSE2 AC093909.1-201ENST00000504731 1122 ntBASIC18.28■□□□□ 0.52
CISHQ9NSE2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 AC116407.3-201ENST00000623905 1129 ntBASIC18.28■□□□□ 0.52
CISHQ9NSE2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CISHQ9NSE2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CISHQ9NSE2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CISHQ9NSE2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CISHQ9NSE2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CISHQ9NSE2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CISHQ9NSE2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CISHQ9NSE2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.28■□□□□ 0.52
CISHQ9NSE2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CISHQ9NSE2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CISHQ9NSE2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CISHQ9NSE2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CISHQ9NSE2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CISHQ9NSE2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CISHQ9NSE2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CISHQ9NSE2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CISHQ9NSE2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 AC117500.6-201ENST00000624871 588 ntBASIC18.27■□□□□ 0.52
CISHQ9NSE2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.27■□□□□ 0.52
CISHQ9NSE2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.27■□□□□ 0.51
CISHQ9NSE2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CISHQ9NSE2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CISHQ9NSE2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CISHQ9NSE2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CISHQ9NSE2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CISHQ9NSE2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CISHQ9NSE2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CISHQ9NSE2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 AC008667.4-201ENST00000607370 168 ntBASIC18.26■□□□□ 0.51
CISHQ9NSE2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 AC005593.1-201ENST00000624894 515 ntBASIC18.26■□□□□ 0.51
CISHQ9NSE2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.26■□□□□ 0.51
CISHQ9NSE2 PGM5P2-202ENST00000637225 1043 ntBASIC18.26■□□□□ 0.51
CISHQ9NSE2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CISHQ9NSE2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.26■□□□□ 0.51
CISHQ9NSE2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CISHQ9NSE2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CISHQ9NSE2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CISHQ9NSE2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.25■□□□□ 0.51
CISHQ9NSE2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.25■□□□□ 0.51
CISHQ9NSE2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CISHQ9NSE2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CISHQ9NSE2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CISHQ9NSE2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CISHQ9NSE2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CISHQ9NSE2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.25■□□□□ 0.51
CISHQ9NSE2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CISHQ9NSE2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms