Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 HMGA1P7-201ENST00000406908 502 ntBASIC18.11■□□□□ 0.49
TLR9Q9NR96 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 TSPY16P-201ENST00000449843 468 ntBASIC18.11■□□□□ 0.49
TLR9Q9NR96 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 AC005412.3-201ENST00000580309 715 ntBASIC18.11■□□□□ 0.49
TLR9Q9NR96 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TLR9Q9NR96 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR9Q9NR96 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.1■□□□□ 0.49
TLR9Q9NR96 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.1■□□□□ 0.49
TLR9Q9NR96 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 UXT-AS1-201ENST00000590504 1525 ntBASIC18.1■□□□□ 0.49
TLR9Q9NR96 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TLR9Q9NR96 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TLR9Q9NR96 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.1■□□□□ 0.49
TLR9Q9NR96 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.1■□□□□ 0.49
TLR9Q9NR96 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.1■□□□□ 0.49
TLR9Q9NR96 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TLR9Q9NR96 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.1■□□□□ 0.49
TLR9Q9NR96 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.1■□□□□ 0.49
TLR9Q9NR96 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TLR9Q9NR96 KRT8P23-201ENST00000560090 1207 ntBASIC18.1■□□□□ 0.49
TLR9Q9NR96 AC140878.1-201ENST00000565277 250 ntBASIC18.1■□□□□ 0.49
TLR9Q9NR96 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 RN7SL204P-201ENST00000582831 262 ntBASIC18.1■□□□□ 0.49
TLR9Q9NR96 LINC01451-201ENST00000623792 534 ntBASIC18.1■□□□□ 0.49
TLR9Q9NR96 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR9Q9NR96 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.09■□□□□ 0.49
TLR9Q9NR96 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.09■□□□□ 0.49
TLR9Q9NR96 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
TLR9Q9NR96 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TLR9Q9NR96 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TLR9Q9NR96 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.09■□□□□ 0.49
TLR9Q9NR96 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.09■□□□□ 0.49
TLR9Q9NR96 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.09■□□□□ 0.49
TLR9Q9NR96 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TLR9Q9NR96 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.09■□□□□ 0.49
TLR9Q9NR96 AL009183.1-201ENST00000603760 355 ntBASIC18.09■□□□□ 0.49
TLR9Q9NR96 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.09■□□□□ 0.49
TLR9Q9NR96 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms