Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC52A3Q9NQ40 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 AC006538.1-201ENST00000567905 1585 ntBASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 AP002414.1-201ENST00000391405 1147 ntBASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 ACTG1P4-201ENST00000425123 1122 ntBASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 AC092647.4-201ENST00000457211 535 ntBASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 HLA-J-202ENST00000469281 1241 ntBASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 KRT8P26-201ENST00000534154 1276 ntBASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 AC010331.1-201ENST00000611423 582 ntBASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC52A3Q9NQ40 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 AC024909.3-201ENST00000611513 2257 ntBASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 AC005052.1-201ENST00000625181 2492 ntBASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 AL136038.3-201ENST00000561909 1096 ntBASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 INTS4P1-201ENST00000438455 1935 ntBASIC16.21■□□□□ 0.19
SLC52A3Q9NQ40 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC52A3Q9NQ40 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC52A3Q9NQ40 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SLC52A3Q9NQ40 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.21■□□□□ 0.18
SLC52A3Q9NQ40 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
SLC52A3Q9NQ40 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.21■□□□□ 0.18
SLC52A3Q9NQ40 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.21■□□□□ 0.18
SLC52A3Q9NQ40 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC52A3Q9NQ40 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC52A3Q9NQ40 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.21■□□□□ 0.18
SLC52A3Q9NQ40 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms