Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD248Q9HCU0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD248Q9HCU0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD248Q9HCU0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD248Q9HCU0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD248Q9HCU0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CD248Q9HCU0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD248Q9HCU0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD248Q9HCU0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD248Q9HCU0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 AC105020.1-201ENST00000435356 2205 ntBASIC18.1■□□□□ 0.49
CD248Q9HCU0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 AC093909.1-201ENST00000504731 1122 ntBASIC18.1■□□□□ 0.49
CD248Q9HCU0 KRT18P58-201ENST00000527480 1120 ntBASIC18.1■□□□□ 0.49
CD248Q9HCU0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.1■□□□□ 0.49
CD248Q9HCU0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD248Q9HCU0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.09■□□□□ 0.49
CD248Q9HCU0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 RPL13AP23-201ENST00000480739 586 ntBASIC18.09■□□□□ 0.49
CD248Q9HCU0 IGHV3-22-201ENST00000520721 359 ntBASIC18.09■□□□□ 0.49
CD248Q9HCU0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 AC025062.2-201ENST00000605477 670 ntBASIC18.09■□□□□ 0.49
CD248Q9HCU0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 AL136379.1-201ENST00000623471 2642 ntBASIC18.09■□□□□ 0.49
CD248Q9HCU0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.09■□□□□ 0.49
CD248Q9HCU0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD248Q9HCU0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD248Q9HCU0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD248Q9HCU0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD248Q9HCU0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD248Q9HCU0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD248Q9HCU0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.08■□□□□ 0.49
CD248Q9HCU0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD248Q9HCU0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD248Q9HCU0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD248Q9HCU0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD248Q9HCU0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD248Q9HCU0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD248Q9HCU0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 AC139530.3-201ENST00000620344 690 ntBASIC18.08■□□□□ 0.48
CD248Q9HCU0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD248Q9HCU0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD248Q9HCU0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.08■□□□□ 0.48
CD248Q9HCU0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD248Q9HCU0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms