Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLK4Q9HAZ1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.77■□□□□ 0.27
CLK4Q9HAZ1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLK4Q9HAZ1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLK4Q9HAZ1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CLK4Q9HAZ1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.77■□□□□ 0.27
CLK4Q9HAZ1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLK4Q9HAZ1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLK4Q9HAZ1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLK4Q9HAZ1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLK4Q9HAZ1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 AC091304.2-201ENST00000564639 760 ntBASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLK4Q9HAZ1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 AC096582.2-201ENST00000510860 516 ntBASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 AL591684.3-201ENST00000605187 298 ntBASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 LINC01451-201ENST00000623792 534 ntBASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLK4Q9HAZ1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms