Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 FAM207CP-201ENST00000443486 507 ntBASIC19.94■□□□□ 0.78
EFCC1Q9HA90 UGT1A2P-201ENST00000454886 866 ntBASIC19.94■□□□□ 0.78
EFCC1Q9HA90 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 LINC02560-201ENST00000596379 459 ntBASIC19.94■□□□□ 0.78
EFCC1Q9HA90 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 AC008761.3-201ENST00000624803 892 ntBASIC19.94■□□□□ 0.78
EFCC1Q9HA90 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.94■□□□□ 0.78
EFCC1Q9HA90 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 PI4KAP1-204ENST00000612579 1703 ntBASIC19.93■□□□□ 0.78
EFCC1Q9HA90 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 OR8S1-201ENST00000310194 1080 ntBASIC19.93■□□□□ 0.78
EFCC1Q9HA90 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 AL359881.2-201ENST00000602973 570 ntBASIC19.93■□□□□ 0.78
EFCC1Q9HA90 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 TUBB3P1-201ENST00000405796 1332 ntBASIC19.93■□□□□ 0.78
EFCC1Q9HA90 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.93■□□□□ 0.78
EFCC1Q9HA90 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 AC002056.1-201ENST00000395613 760 ntBASIC19.92■□□□□ 0.78
EFCC1Q9HA90 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 AC069335.1-201ENST00000489972 472 ntBASIC19.92■□□□□ 0.78
EFCC1Q9HA90 MEIS3P1-201ENST00000495167 958 ntBASIC19.92■□□□□ 0.78
EFCC1Q9HA90 AP005018.1-201ENST00000525475 301 ntBASIC19.92■□□□□ 0.78
EFCC1Q9HA90 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EFCC1Q9HA90 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
EFCC1Q9HA90 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EFCC1Q9HA90 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.91■□□□□ 0.78
EFCC1Q9HA90 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
EFCC1Q9HA90 WIZP1-201ENST00000531444 2299 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms