Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PIF1Q9H611 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PIF1Q9H611 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PIF1Q9H611 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.45■□□□□ 0.22
PIF1Q9H611 SPDYE15P-201ENST00000424157 909 ntBASIC16.45■□□□□ 0.22
PIF1Q9H611 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.45■□□□□ 0.22
PIF1Q9H611 HOMER2P1-201ENST00000455653 964 ntBASIC16.45■□□□□ 0.22
PIF1Q9H611 AC068472.1-201ENST00000474589 881 ntBASIC16.45■□□□□ 0.22
PIF1Q9H611 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.45■□□□□ 0.22
PIF1Q9H611 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.45■□□□□ 0.22
PIF1Q9H611 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 AL441883.1-201ENST00000566170 1045 ntBASIC16.45■□□□□ 0.22
PIF1Q9H611 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 AC010460.3-201ENST00000511359 1579 ntBASIC16.45■□□□□ 0.22
PIF1Q9H611 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PIF1Q9H611 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.45■□□□□ 0.22
PIF1Q9H611 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PIF1Q9H611 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PIF1Q9H611 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PIF1Q9H611 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.44■□□□□ 0.22
PIF1Q9H611 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PIF1Q9H611 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PIF1Q9H611 AL353692.3-201ENST00000407031 1396 ntBASIC16.44■□□□□ 0.22
PIF1Q9H611 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 RNF152P1-201ENST00000397754 604 ntBASIC16.44■□□□□ 0.22
PIF1Q9H611 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PIF1Q9H611 AP003733.1-201ENST00000491725 852 ntBASIC16.44■□□□□ 0.22
PIF1Q9H611 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.44■□□□□ 0.22
PIF1Q9H611 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.44■□□□□ 0.22
PIF1Q9H611 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PIF1Q9H611 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PIF1Q9H611 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.44■□□□□ 0.22
PIF1Q9H611 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.44■□□□□ 0.22
PIF1Q9H611 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PIF1Q9H611 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.44■□□□□ 0.22
PIF1Q9H611 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PIF1Q9H611 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.44■□□□□ 0.22
PIF1Q9H611 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.44■□□□□ 0.22
PIF1Q9H611 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
PIF1Q9H611 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.43■□□□□ 0.22
PIF1Q9H611 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PIF1Q9H611 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PIF1Q9H611 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.43■□□□□ 0.22
PIF1Q9H611 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PIF1Q9H611 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PIF1Q9H611 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PIF1Q9H611 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PIF1Q9H611 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.43■□□□□ 0.22
PIF1Q9H611 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PIF1Q9H611 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PIF1Q9H611 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PIF1Q9H611 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.43■□□□□ 0.22
PIF1Q9H611 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PIF1Q9H611 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
PIF1Q9H611 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PIF1Q9H611 IGHGP-201ENST00000390555 1178 ntBASIC16.43■□□□□ 0.22
PIF1Q9H611 RCN1P1-201ENST00000400413 996 ntBASIC16.43■□□□□ 0.22
PIF1Q9H611 HLA-F-220ENST00000434407 884 ntBASIC16.43■□□□□ 0.22
PIF1Q9H611 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.43■□□□□ 0.22
PIF1Q9H611 YBX1P2-201ENST00000489612 999 ntBASIC16.43■□□□□ 0.22
PIF1Q9H611 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PIF1Q9H611 ZNF444P1-201ENST00000559497 298 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms