Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS11Q9H270 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
VPS11Q9H270 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.3■□□□□ 0.36
VPS11Q9H270 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS11Q9H270 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VPS11Q9H270 AC006011.2-201ENST00000621313 1158 ntBASIC17.3■□□□□ 0.36
VPS11Q9H270 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS11Q9H270 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS11Q9H270 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
VPS11Q9H270 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
VPS11Q9H270 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VPS11Q9H270 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS11Q9H270 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.29■□□□□ 0.36
VPS11Q9H270 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.29■□□□□ 0.36
VPS11Q9H270 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.29■□□□□ 0.36
VPS11Q9H270 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS11Q9H270 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS11Q9H270 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS11Q9H270 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS11Q9H270 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS11Q9H270 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VPS11Q9H270 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS11Q9H270 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS11Q9H270 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS11Q9H270 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS11Q9H270 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
VPS11Q9H270 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 AL513523.2-202ENST00000427283 2040 ntBASIC17.28■□□□□ 0.36
VPS11Q9H270 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS11Q9H270 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VPS11Q9H270 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS11Q9H270 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VPS11Q9H270 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS11Q9H270 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS11Q9H270 GUSBP12-201ENST00000513727 720 ntBASIC17.28■□□□□ 0.36
VPS11Q9H270 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
VPS11Q9H270 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VPS11Q9H270 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS11Q9H270 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
VPS11Q9H270 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS11Q9H270 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS11Q9H270 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS11Q9H270 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VPS11Q9H270 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS11Q9H270 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.27■□□□□ 0.36
VPS11Q9H270 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.27■□□□□ 0.36
VPS11Q9H270 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS11Q9H270 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS11Q9H270 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS11Q9H270 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS11Q9H270 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS11Q9H270 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS11Q9H270 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms