Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 HILS1-202ENST00000545329 423 ntBASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 STK25P1-201ENST00000585406 838 ntBASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 AC019129.2-201ENST00000609837 1235 ntBASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 BCL2-203ENST00000589955 5011 ntBASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2OQ9C0C9 UXT-AS1-201ENST00000590504 1525 ntBASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 PHGDH-209ENST00000641074 1780 ntBASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 AC241585.1-201ENST00000433527 519 ntBASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 RARRES2P8-201ENST00000566335 367 ntBASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 MIR6080-201ENST00000617359 66 ntBASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 AC093010.1-201ENST00000473625 1624 ntBASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2OQ9C0C9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2OQ9C0C9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.83■□□□□ 0.61
UBE2OQ9C0C9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2OQ9C0C9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2OQ9C0C9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2OQ9C0C9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.83■□□□□ 0.61
UBE2OQ9C0C9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2OQ9C0C9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.83■□□□□ 0.61
UBE2OQ9C0C9 AKAP8P1-201ENST00000434743 1349 ntBASIC18.83■□□□□ 0.61
UBE2OQ9C0C9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 SPCS2P4-201ENST00000436160 681 ntBASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 SPDYE14P-201ENST00000442619 822 ntBASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.83■□□□□ 0.6
UBE2OQ9C0C9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 AC004890.2-204ENST00000481968 304 ntBASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms