Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC3Q9BY71 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC3Q9BY71 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.83■□□□□ 0.45
LRRC3Q9BY71 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC3Q9BY71 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC3Q9BY71 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.83■□□□□ 0.45
LRRC3Q9BY71 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC3Q9BY71 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
LRRC3Q9BY71 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC3Q9BY71 AC008764.6-201ENST00000595909 2069 ntBASIC17.83■□□□□ 0.45
LRRC3Q9BY71 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC3Q9BY71 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
LRRC3Q9BY71 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC3Q9BY71 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 HLA-J-203ENST00000494367 1087 ntBASIC17.82■□□□□ 0.44
LRRC3Q9BY71 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 AC093028.1-201ENST00000622998 982 ntBASIC17.82■□□□□ 0.44
LRRC3Q9BY71 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC3Q9BY71 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 AC002056.1-201ENST00000395613 760 ntBASIC17.81■□□□□ 0.44
LRRC3Q9BY71 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 AC093520.2-201ENST00000561830 333 ntBASIC17.81■□□□□ 0.44
LRRC3Q9BY71 MIR4515-201ENST00000584082 81 ntBASIC17.81■□□□□ 0.44
LRRC3Q9BY71 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms