Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 AL645929.1-201ENST00000420084 975 ntBASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 TSPY22P-201ENST00000427496 604 ntBASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 RN7SL606P-201ENST00000472779 293 ntBASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 AC111152.3-201ENST00000569699 673 ntBASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 AL138831.2-201ENST00000606564 490 ntBASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 AL135999.2-201ENST00000622438 1686 ntBASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDHD3Q9BSH5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 AC006449.5-201ENST00000610658 2098 ntBASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 AC122714.2-201ENST00000502787 707 ntBASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 STK25P1-201ENST00000585406 838 ntBASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDHD3Q9BSH5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 AC104076.2-201ENST00000448912 469 ntBASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HDHD3Q9BSH5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms