Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHOX2BQ99453 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PHOX2BQ99453 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.33■□□□□ 0.37
PHOX2BQ99453 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHOX2BQ99453 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.33■□□□□ 0.37
PHOX2BQ99453 AC135050.7-201ENST00000624508 2218 ntBASIC17.33■□□□□ 0.37
PHOX2BQ99453 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHOX2BQ99453 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHOX2BQ99453 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.33■□□□□ 0.37
PHOX2BQ99453 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.33■□□□□ 0.37
PHOX2BQ99453 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PHOX2BQ99453 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHOX2BQ99453 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PHOX2BQ99453 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PHOX2BQ99453 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHOX2BQ99453 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHOX2BQ99453 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PHOX2BQ99453 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.33■□□□□ 0.36
PHOX2BQ99453 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHOX2BQ99453 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHOX2BQ99453 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PHOX2BQ99453 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PHOX2BQ99453 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.33■□□□□ 0.36
PHOX2BQ99453 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.33■□□□□ 0.36
PHOX2BQ99453 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHOX2BQ99453 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PHOX2BQ99453 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.33■□□□□ 0.36
PHOX2BQ99453 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.33■□□□□ 0.36
PHOX2BQ99453 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.33■□□□□ 0.36
PHOX2BQ99453 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHOX2BQ99453 GPR182-203ENST00000622922 591 ntBASIC17.33■□□□□ 0.36
PHOX2BQ99453 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHOX2BQ99453 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PHOX2BQ99453 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
PHOX2BQ99453 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHOX2BQ99453 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHOX2BQ99453 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHOX2BQ99453 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHOX2BQ99453 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 AC002056.1-201ENST00000395613 760 ntBASIC17.32■□□□□ 0.36
PHOX2BQ99453 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 SPDYE14P-201ENST00000442619 822 ntBASIC17.32■□□□□ 0.36
PHOX2BQ99453 SPTLC1P1-201ENST00000447199 261 ntBASIC17.32■□□□□ 0.36
PHOX2BQ99453 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.32■□□□□ 0.36
PHOX2BQ99453 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 AC132938.5-201ENST00000624980 1813 ntBASIC17.32■□□□□ 0.36
PHOX2BQ99453 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHOX2BQ99453 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.32■□□□□ 0.36
PHOX2BQ99453 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHOX2BQ99453 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHOX2BQ99453 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHOX2BQ99453 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 AC009113.1-201ENST00000570267 2443 ntBASIC17.31■□□□□ 0.36
PHOX2BQ99453 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHOX2BQ99453 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHOX2BQ99453 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHOX2BQ99453 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 INE1-201ENST00000456273 945 ntBASIC17.31■□□□□ 0.36
PHOX2BQ99453 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 FAM86C2P-203ENST00000528684 1004 ntBASIC17.31■□□□□ 0.36
PHOX2BQ99453 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms