Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 AC125807.1-201ENST00000483097 614 ntBASIC22.4■■□□□ 1.18
NBPF4Q96M43 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 AC091167.2-201ENST00000579581 588 ntBASIC22.4■■□□□ 1.18
NBPF4Q96M43 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 AC093525.9-201ENST00000624961 1746 ntBASIC22.4■■□□□ 1.18
NBPF4Q96M43 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NBPF4Q96M43 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
NBPF4Q96M43 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NBPF4Q96M43 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
NBPF4Q96M43 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
NBPF4Q96M43 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
NBPF4Q96M43 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
NBPF4Q96M43 AC008764.6-201ENST00000595909 2069 ntBASIC22.39■■□□□ 1.17
NBPF4Q96M43 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 CD81-202ENST00000381036 880 ntTSL 3 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 AC236430.1-201ENST00000402231 743 ntBASIC22.39■■□□□ 1.17
NBPF4Q96M43 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 BASP1P1-201ENST00000430708 665 ntBASIC22.39■■□□□ 1.17
NBPF4Q96M43 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 TAF8-206ENST00000472818 719 ntTSL 2 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 AC140878.1-201ENST00000565277 250 ntBASIC22.39■■□□□ 1.17
NBPF4Q96M43 AL138918.1-201ENST00000568306 659 ntBASIC22.39■■□□□ 1.17
NBPF4Q96M43 AP000842.3-202ENST00000569238 1080 ntBASIC22.39■■□□□ 1.17
NBPF4Q96M43 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 RN7SL204P-201ENST00000582831 262 ntBASIC22.39■■□□□ 1.17
NBPF4Q96M43 AC008267.7-201ENST00000624570 1194 ntBASIC22.39■■□□□ 1.17
NBPF4Q96M43 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC22.39■■□□□ 1.17
NBPF4Q96M43 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NBPF4Q96M43 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NBPF4Q96M43 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NBPF4Q96M43 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NBPF4Q96M43 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC22.38■■□□□ 1.17
NBPF4Q96M43 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
NBPF4Q96M43 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC22.38■■□□□ 1.17
NBPF4Q96M43 PPP6R2P1-201ENST00000450880 1275 ntBASIC22.38■■□□□ 1.17
NBPF4Q96M43 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NBPF4Q96M43 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC22.38■■□□□ 1.17
NBPF4Q96M43 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
NBPF4Q96M43 AC027307.2-201ENST00000591252 911 ntBASIC22.38■■□□□ 1.17
NBPF4Q96M43 AC239800.4-201ENST00000603712 296 ntBASIC22.38■■□□□ 1.17
NBPF4Q96M43 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC22.38■■□□□ 1.17
NBPF4Q96M43 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
NBPF4Q96M43 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
NBPF4Q96M43 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NBPF4Q96M43 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NBPF4Q96M43 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.38■■□□□ 1.17
NBPF4Q96M43 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.38■■□□□ 1.17
NBPF4Q96M43 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NBPF4Q96M43 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
NBPF4Q96M43 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NBPF4Q96M43 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NBPF4Q96M43 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NBPF4Q96M43 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NBPF4Q96M43 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.37■■□□□ 1.17
NBPF4Q96M43 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NBPF4Q96M43 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NBPF4Q96M43 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
NBPF4Q96M43 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NBPF4Q96M43 BAD-202ENST00000394531 631 ntTSL 3 BASIC22.37■■□□□ 1.17
NBPF4Q96M43 AC002472.2-201ENST00000442739 958 ntBASIC22.37■■□□□ 1.17
NBPF4Q96M43 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NBPF4Q96M43 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC22.37■■□□□ 1.17
NBPF4Q96M43 ALG1L8P-201ENST00000533887 760 ntBASIC22.37■■□□□ 1.17
NBPF4Q96M43 BAD-207ENST00000544785 525 ntTSL 3 BASIC22.37■■□□□ 1.17
NBPF4Q96M43 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
NBPF4Q96M43 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC22.37■■□□□ 1.17
NBPF4Q96M43 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
NBPF4Q96M43 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC22.37■■□□□ 1.17
NBPF4Q96M43 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms