Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 AC093458.2-201ENST00000623150 629 ntBASIC18.15■□□□□ 0.5
TRIM11Q96F44 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM11Q96F44 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM11Q96F44 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM11Q96F44 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
TRIM11Q96F44 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.14■□□□□ 0.5
TRIM11Q96F44 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM11Q96F44 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM11Q96F44 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM11Q96F44 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRIM11Q96F44 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRIM11Q96F44 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM11Q96F44 AC138894.3-201ENST00000603787 634 ntBASIC18.14■□□□□ 0.49
TRIM11Q96F44 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM11Q96F44 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM11Q96F44 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRIM11Q96F44 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM11Q96F44 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 AC099398.1-201ENST00000567919 2776 ntBASIC18.13■□□□□ 0.49
TRIM11Q96F44 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 LINC00982-205ENST00000420957 435 ntBASIC18.13■□□□□ 0.49
TRIM11Q96F44 PRYP5-201ENST00000451909 266 ntBASIC18.13■□□□□ 0.49
TRIM11Q96F44 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.13■□□□□ 0.49
TRIM11Q96F44 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 AP005117.1-201ENST00000584346 1413 ntBASIC18.13■□□□□ 0.49
TRIM11Q96F44 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRIM11Q96F44 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 AC004817.3-201ENST00000602957 2129 ntBASIC18.13■□□□□ 0.49
TRIM11Q96F44 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM11Q96F44 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 RBM17P3-201ENST00000417687 1192 ntBASIC18.12■□□□□ 0.49
TRIM11Q96F44 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms