Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS33AQ96AX1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 AC073508.3-201ENST00000619697 1419 ntBASIC16.54■□□□□ 0.24
VPS33AQ96AX1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.54■□□□□ 0.24
VPS33AQ96AX1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 AL137013.1-201ENST00000432946 1228 ntBASIC16.53■□□□□ 0.24
VPS33AQ96AX1 AC112907.2-201ENST00000448639 330 ntBASIC16.53■□□□□ 0.24
VPS33AQ96AX1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 HYMAI.1-201ENST00000620949 238 ntBASIC16.53■□□□□ 0.24
VPS33AQ96AX1 AC133561.5-201ENST00000635547 218 ntBASIC16.53■□□□□ 0.24
VPS33AQ96AX1 AC066615.1-201ENST00000640911 628 ntBASIC16.53■□□□□ 0.24
VPS33AQ96AX1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
VPS33AQ96AX1 AL596257.1-201ENST00000641463 2694 ntBASIC16.53■□□□□ 0.24
VPS33AQ96AX1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS33AQ96AX1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS33AQ96AX1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms