Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HPS1Q92902 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.79■□□□□ 0.12
HPS1Q92902 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.79■□□□□ 0.12
HPS1Q92902 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 AC068587.9-201ENST00000641814 219 ntBASIC15.79■□□□□ 0.12
HPS1Q92902 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.79■□□□□ 0.12
HPS1Q92902 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.79■□□□□ 0.12
HPS1Q92902 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.79■□□□□ 0.12
HPS1Q92902 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
HPS1Q92902 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
HPS1Q92902 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.79■□□□□ 0.12
HPS1Q92902 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
HPS1Q92902 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HPS1Q92902 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HPS1Q92902 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS1Q92902 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HPS1Q92902 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS1Q92902 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS1Q92902 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.78■□□□□ 0.12
HPS1Q92902 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.78■□□□□ 0.12
HPS1Q92902 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.78■□□□□ 0.12
HPS1Q92902 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.78■□□□□ 0.12
HPS1Q92902 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.78■□□□□ 0.12
HPS1Q92902 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS1Q92902 AL136038.3-201ENST00000561909 1096 ntBASIC15.78■□□□□ 0.12
HPS1Q92902 MIR4674-201ENST00000582457 87 ntBASIC15.78■□□□□ 0.12
HPS1Q92902 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 CR769767.2-201ENST00000622735 460 ntBASIC15.78■□□□□ 0.12
HPS1Q92902 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HPS1Q92902 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS1Q92902 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS1Q92902 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
HPS1Q92902 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HPS1Q92902 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS1Q92902 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 KRT8P7-201ENST00000533003 1432 ntBASIC15.77■□□□□ 0.12
HPS1Q92902 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HPS1Q92902 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.77■□□□□ 0.12
HPS1Q92902 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.77■□□□□ 0.12
HPS1Q92902 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HPS1Q92902 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HPS1Q92902 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.77■□□□□ 0.12
HPS1Q92902 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.77■□□□□ 0.12
HPS1Q92902 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.77■□□□□ 0.12
HPS1Q92902 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.77■□□□□ 0.12
HPS1Q92902 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
HPS1Q92902 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.77■□□□□ 0.12
HPS1Q92902 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.77■□□□□ 0.12
HPS1Q92902 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.77■□□□□ 0.12
HPS1Q92902 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.77■□□□□ 0.12
HPS1Q92902 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC15.77■□□□□ 0.12
HPS1Q92902 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HPS1Q92902 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
HPS1Q92902 AC036111.1-201ENST00000533973 1582 ntBASIC15.77■□□□□ 0.11
HPS1Q92902 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HPS1Q92902 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HPS1Q92902 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HPS1Q92902 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.77■□□□□ 0.11
HPS1Q92902 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HPS1Q92902 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 AC099063.4-201ENST00000641099 1602 ntBASIC15.76■□□□□ 0.11
HPS1Q92902 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.76■□□□□ 0.11
HPS1Q92902 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
HPS1Q92902 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HPS1Q92902 AC006449.5-201ENST00000610658 2098 ntBASIC15.76■□□□□ 0.11
HPS1Q92902 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
HPS1Q92902 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms