Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 LAGE3P1-201ENST00000425356 484 ntBASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 AC006557.2-201ENST00000592985 1240 ntBASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 AC064862.7-201ENST00000604520 867 ntBASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 AL139424.1-201ENST00000607572 797 ntBASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
SRFBP1Q8NEF9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 RPS2P28-201ENST00000314255 741 ntBASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 EMBP1-201ENST00000458200 901 ntBASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 AC021087.4-201ENST00000563761 564 ntBASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 RN7SL510P-201ENST00000581311 263 ntBASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.37■□□□□ 0.21
SRFBP1Q8NEF9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 AC124067.4-201ENST00000519691 2379 ntBASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 AF186996.4-201ENST00000467186 377 ntBASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms