Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 AC003669.1-201ENST00000334569 611 ntBASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 AC106795.1-205ENST00000512851 1056 ntBASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 REXO1L6P-202ENST00000619970 1078 ntBASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 AC079776.2-201ENST00000641154 1609 ntBASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 EMBP1-201ENST00000458200 901 ntBASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 BX005266.1-201ENST00000473402 457 ntBASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 MTDHP3-201ENST00000594186 672 ntBASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIMC1Q8NDZ2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SIMC1Q8NDZ2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.21■□□□□ 0.18
SIMC1Q8NDZ2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SIMC1Q8NDZ2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 AC092053.1-201ENST00000605787 1936 ntBASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 NKAPP1-205ENST00000585790 367 ntBASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIMC1Q8NDZ2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms