Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 AC004817.3-201ENST00000602957 2129 ntBASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC155Q8N6L0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 MIR4751-201ENST00000578027 74 ntBASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 REXO1L11P-201ENST00000620964 1927 ntBASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC155Q8N6L0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC155Q8N6L0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 AL353593.2-201ENST00000602529 1483 ntBASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 ELK2BP-201ENST00000415014 1224 ntBASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC155Q8N6L0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms