Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 AL596325.1-201ENST00000563991 1082 ntBASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 AC008764.6-201ENST00000595909 2069 ntBASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
COL27A1Q8IZC6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL27A1Q8IZC6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 AL133215.2-201ENST00000609242 977 ntBASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 AC018529.1-201ENST00000613063 361 ntBASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 AC135050.7-201ENST00000624508 2218 ntBASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 AL662799.1-202ENST00000614205 422 ntBASIC15.91■□□□□ 0.14
COL27A1Q8IZC6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 AC016396.2-201ENST00000562575 1417 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms