Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 GPR32P1-201ENST00000601788 811 ntBASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 AC019129.2-201ENST00000609837 1235 ntBASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 EGFEM1P-202ENST00000431685 1563 ntBASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUDCD3Q8IVD9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 KRT18P22-201ENST00000402024 1347 ntBASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUDCD3Q8IVD9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NUDCD3Q8IVD9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.08■□□□□ 0.33
NUDCD3Q8IVD9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NUDCD3Q8IVD9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NUDCD3Q8IVD9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
NUDCD3Q8IVD9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NUDCD3Q8IVD9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NUDCD3Q8IVD9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.08■□□□□ 0.33
NUDCD3Q8IVD9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NUDCD3Q8IVD9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 MIR4497-201ENST00000583208 89 ntBASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 AL031432.5-201ENST00000641059 760 ntBASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 AP006294.2-201ENST00000641667 209 ntBASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 AL513523.2-202ENST00000427283 2040 ntBASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.08■□□□□ 0.32
NUDCD3Q8IVD9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms