Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
COL23A1Q86Y22 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC21.27■■□□□ 1
COL23A1Q86Y22 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.27■■□□□ 1
COL23A1Q86Y22 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.27■■□□□ 1
COL23A1Q86Y22 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.27■■□□□ 1
COL23A1Q86Y22 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.27■■□□□ 1
COL23A1Q86Y22 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.27■■□□□ 1
COL23A1Q86Y22 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.27■■□□□ 1
COL23A1Q86Y22 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
COL23A1Q86Y22 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL23A1Q86Y22 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL23A1Q86Y22 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.27■□□□□ 0.99
COL23A1Q86Y22 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
COL23A1Q86Y22 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 AL589739.1-201ENST00000607720 493 ntBASIC21.26■□□□□ 0.99
COL23A1Q86Y22 AL033527.4-201ENST00000641026 673 ntBASIC21.26■□□□□ 0.99
COL23A1Q86Y22 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 WIZP1-201ENST00000531444 2299 ntBASIC21.26■□□□□ 0.99
COL23A1Q86Y22 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 CETN4P-206ENST00000642099 2168 ntBASIC21.26■□□□□ 0.99
COL23A1Q86Y22 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL23A1Q86Y22 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 MTND6P24-201ENST00000440466 518 ntBASIC21.25■□□□□ 0.99
COL23A1Q86Y22 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 AC091167.2-201ENST00000579581 588 ntBASIC21.25■□□□□ 0.99
COL23A1Q86Y22 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
COL23A1Q86Y22 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 AL391825.1-201ENST00000457671 1364 ntBASIC21.24■□□□□ 0.99
COL23A1Q86Y22 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 AC011495.1-201ENST00000498085 584 ntBASIC21.24■□□□□ 0.99
COL23A1Q86Y22 AC119751.2-201ENST00000504529 210 ntBASIC21.24■□□□□ 0.99
COL23A1Q86Y22 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 RN7SL828P-201ENST00000607615 303 ntBASIC21.24■□□□□ 0.99
COL23A1Q86Y22 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.24■□□□□ 0.99
COL23A1Q86Y22 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL23A1Q86Y22 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL23A1Q86Y22 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.23■□□□□ 0.99
COL23A1Q86Y22 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL23A1Q86Y22 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
COL23A1Q86Y22 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.23■□□□□ 0.99
COL23A1Q86Y22 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms