Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PACS2Q86VP3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.32■□□□□ 0.36
PACS2Q86VP3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 LINC00304-203ENST00000565008 1864 ntBASIC17.32■□□□□ 0.36
PACS2Q86VP3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.32■□□□□ 0.36
PACS2Q86VP3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.32■□□□□ 0.36
PACS2Q86VP3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PACS2Q86VP3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 INGX-201ENST00000359239 846 ntBASIC17.31■□□□□ 0.36
PACS2Q86VP3 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 LST1-206ENST00000376090 689 ntTSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 LST1-209ENST00000376096 565 ntTSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 LST1-210ENST00000376099 610 ntTSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 AC005521.1-201ENST00000393351 872 ntBASIC17.31■□□□□ 0.36
PACS2Q86VP3 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 LST1-214ENST00000418507 726 ntTSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 FAM87A-204ENST00000613235 858 ntBASIC17.31■□□□□ 0.36
PACS2Q86VP3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 AC013268.4-201ENST00000637413 2228 ntBASIC17.31■□□□□ 0.36
PACS2Q86VP3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PACS2Q86VP3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PACS2Q86VP3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 AP003041.3-201ENST00000527151 707 ntBASIC17.3■□□□□ 0.36
PACS2Q86VP3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 AC092865.7-201ENST00000641832 219 ntBASIC17.3■□□□□ 0.36
PACS2Q86VP3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms