Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.43□□□□□ -0.58
SCXQ7RTU7 TP73-AS1-210ENST00000637775 1455 ntBASIC11.43□□□□□ -0.58
SCXQ7RTU7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SCXQ7RTU7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SCXQ7RTU7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SCXQ7RTU7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SCXQ7RTU7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC11.43□□□□□ -0.58
SCXQ7RTU7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC11.43□□□□□ -0.58
SCXQ7RTU7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SCXQ7RTU7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SCXQ7RTU7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.43□□□□□ -0.58
SCXQ7RTU7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SCXQ7RTU7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.43□□□□□ -0.58
SCXQ7RTU7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SCXQ7RTU7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 UBALD1-205ENST00000590891 2641 ntBASIC11.42□□□□□ -0.58
SCXQ7RTU7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 FAM197Y8-203ENST00000450145 560 ntBASIC11.42□□□□□ -0.58
SCXQ7RTU7 AF186996.4-201ENST00000467186 377 ntBASIC11.42□□□□□ -0.58
SCXQ7RTU7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 AP001005.1-201ENST00000571755 1248 ntBASIC11.42□□□□□ -0.58
SCXQ7RTU7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 AL773604.1-201ENST00000617417 272 ntBASIC11.42□□□□□ -0.58
SCXQ7RTU7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 AL391005.1-201ENST00000623953 2435 ntBASIC11.42□□□□□ -0.58
SCXQ7RTU7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.42□□□□□ -0.58
SCXQ7RTU7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SCXQ7RTU7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 ANO7L1-203ENST00000602586 1720 ntBASIC11.41□□□□□ -0.58
SCXQ7RTU7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 RCN1P2-201ENST00000398357 915 ntBASIC11.41□□□□□ -0.58
SCXQ7RTU7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 AL590627.1-203ENST00000421194 1026 ntBASIC11.41□□□□□ -0.58
SCXQ7RTU7 KRT18P67-201ENST00000432816 1264 ntBASIC11.41□□□□□ -0.58
SCXQ7RTU7 MTCL1P1-201ENST00000446207 792 ntBASIC11.41□□□□□ -0.58
SCXQ7RTU7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 AC132008.2-207ENST00000454517 770 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms