Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 RPSAP43-201ENST00000402237 625 ntBASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 RBM17P3-201ENST00000417687 1192 ntBASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HERC4Q5GLZ8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 FAM215A-202ENST00000632077 792 ntBASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HERC4Q5GLZ8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 BX005266.1-201ENST00000473402 457 ntBASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 NKAPP1-205ENST00000585790 367 ntBASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 AC008608.2-201ENST00000606089 416 ntBASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 AC027601.4-201ENST00000611259 610 ntBASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC4Q5GLZ8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC4Q5GLZ8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.17■□□□□ 0.66
HERC4Q5GLZ8 AC097637.2-201ENST00000624096 1997 ntBASIC19.17■□□□□ 0.66
HERC4Q5GLZ8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC4Q5GLZ8 AC020916.1-201ENST00000587762 1774 ntBASIC19.17■□□□□ 0.66
HERC4Q5GLZ8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms