Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 DRAXINP1-201ENST00000437611 948 ntBASIC16.72■□□□□ 0.27
SGO1Q5FBB7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 KRT18P35-201ENST00000510488 1269 ntBASIC16.72■□□□□ 0.27
SGO1Q5FBB7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 AL135999.2-201ENST00000622438 1686 ntBASIC16.72■□□□□ 0.27
SGO1Q5FBB7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SGO1Q5FBB7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.71■□□□□ 0.27
SGO1Q5FBB7 AC132938.5-201ENST00000624980 1813 ntBASIC16.71■□□□□ 0.27
SGO1Q5FBB7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 AC092068.3-201ENST00000587894 2016 ntBASIC16.71■□□□□ 0.27
SGO1Q5FBB7 ARMC10P1-201ENST00000313754 855 ntBASIC16.71■□□□□ 0.27
SGO1Q5FBB7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 RCN1P2-201ENST00000398357 915 ntBASIC16.71■□□□□ 0.27
SGO1Q5FBB7 KLF4P1-201ENST00000412782 1185 ntBASIC16.71■□□□□ 0.27
SGO1Q5FBB7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 AC073592.5-201ENST00000624854 528 ntBASIC16.71■□□□□ 0.27
SGO1Q5FBB7 AP000550.4-202ENST00000639755 178 ntBASIC16.71■□□□□ 0.27
SGO1Q5FBB7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 AL353593.2-201ENST00000602529 1483 ntBASIC16.71■□□□□ 0.27
SGO1Q5FBB7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 UBALD1-205ENST00000590891 2641 ntBASIC16.71■□□□□ 0.27
SGO1Q5FBB7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SGO1Q5FBB7 AC124067.4-201ENST00000519691 2379 ntBASIC16.71■□□□□ 0.26
SGO1Q5FBB7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.71■□□□□ 0.26
SGO1Q5FBB7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SGO1Q5FBB7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.71■□□□□ 0.26
SGO1Q5FBB7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SGO1Q5FBB7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms