Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.64■□□□□ 0.74
USH1GQ495M9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.64■□□□□ 0.73
USH1GQ495M9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USH1GQ495M9 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.64■□□□□ 0.73
USH1GQ495M9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USH1GQ495M9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USH1GQ495M9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.64■□□□□ 0.73
USH1GQ495M9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.64■□□□□ 0.73
USH1GQ495M9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.64■□□□□ 0.73
USH1GQ495M9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.64■□□□□ 0.73
USH1GQ495M9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.64■□□□□ 0.73
USH1GQ495M9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.64■□□□□ 0.73
USH1GQ495M9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.64■□□□□ 0.73
USH1GQ495M9 AC005829.1-201ENST00000570002 483 ntBASIC19.64■□□□□ 0.73
USH1GQ495M9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.64■□□□□ 0.73
USH1GQ495M9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USH1GQ495M9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.64■□□□□ 0.73
USH1GQ495M9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.64■□□□□ 0.73
USH1GQ495M9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.64■□□□□ 0.73
USH1GQ495M9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USH1GQ495M9 AC134684.3-201ENST00000641758 218 ntBASIC19.64■□□□□ 0.73
USH1GQ495M9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.64■□□□□ 0.73
USH1GQ495M9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
USH1GQ495M9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USH1GQ495M9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USH1GQ495M9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.64■□□□□ 0.73
USH1GQ495M9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
USH1GQ495M9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USH1GQ495M9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
USH1GQ495M9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
USH1GQ495M9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
USH1GQ495M9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.63■□□□□ 0.73
USH1GQ495M9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.63■□□□□ 0.73
USH1GQ495M9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.63■□□□□ 0.73
USH1GQ495M9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USH1GQ495M9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
USH1GQ495M9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.63■□□□□ 0.73
USH1GQ495M9 AC004967.1-201ENST00000453589 447 ntBASIC19.63■□□□□ 0.73
USH1GQ495M9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.63■□□□□ 0.73
USH1GQ495M9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.63■□□□□ 0.73
USH1GQ495M9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.63■□□□□ 0.73
USH1GQ495M9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
USH1GQ495M9 AC107918.2-201ENST00000530817 355 ntBASIC19.63■□□□□ 0.73
USH1GQ495M9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USH1GQ495M9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
USH1GQ495M9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.63■□□□□ 0.73
USH1GQ495M9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USH1GQ495M9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.63■□□□□ 0.73
USH1GQ495M9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.62■□□□□ 0.73
USH1GQ495M9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.62■□□□□ 0.73
USH1GQ495M9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
USH1GQ495M9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.62■□□□□ 0.73
USH1GQ495M9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.62■□□□□ 0.73
USH1GQ495M9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 AC129492.6-201ENST00000611383 1305 ntBASIC19.62■□□□□ 0.73
USH1GQ495M9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 LETM1P2-201ENST00000597330 2178 ntBASIC19.62■□□□□ 0.73
USH1GQ495M9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.62■□□□□ 0.73
USH1GQ495M9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
USH1GQ495M9 AC074386.1-202ENST00000463561 864 ntBASIC19.62■□□□□ 0.73
USH1GQ495M9 MIR4469-201ENST00000583919 79 ntBASIC19.62■□□□□ 0.73
USH1GQ495M9 C20orf181-201ENST00000623918 480 ntBASIC19.62■□□□□ 0.73
USH1GQ495M9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.62■□□□□ 0.73
USH1GQ495M9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
USH1GQ495M9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 PKD1P1-201ENST00000458669 6805 ntBASIC19.62■□□□□ 0.73
USH1GQ495M9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 AC116353.5-201ENST00000638148 1699 ntBASIC19.62■□□□□ 0.73
USH1GQ495M9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
USH1GQ495M9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USH1GQ495M9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
USH1GQ495M9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.61■□□□□ 0.73
USH1GQ495M9 AC106820.2-201ENST00000563775 3264 ntBASIC19.61■□□□□ 0.73
USH1GQ495M9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USH1GQ495M9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms