Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SPCS2P4-201ENST00000436160 681 ntBASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 AL592309.1-201ENST00000443127 649 ntBASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 AC068880.1-201ENST00000507289 2297 ntBASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 Z92544.3-201ENST00000624747 417 ntBASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHROOM1Q2M3G4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 AC005237.2-201ENST00000434368 219 ntBASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 DUX4L27-201ENST00000554796 1261 ntBASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 SPCS2P1-201ENST00000561636 679 ntBASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHROOM1Q2M3G4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 AC012569.1-201ENST00000591191 1524 ntBASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 BCRP1-201ENST00000444246 691 ntBASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 AL009183.1-201ENST00000603760 355 ntBASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM1Q2M3G4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 FAM8A3P-201ENST00000427218 844 ntBASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 LINC01225-203ENST00000563550 1244 ntBASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 RARRES2P8-201ENST00000566335 367 ntBASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 AC005412.3-201ENST00000580309 715 ntBASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 MIR3197-201ENST00000582241 73 ntBASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 AC116353.5-201ENST00000638148 1699 ntBASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM1Q2M3G4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 CROCCP2-202ENST00000412962 2773 ntBASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.85■□□□□ 0.77
SHROOM1Q2M3G4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms