Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 NEFHP1-201ENST00000412845 2629 ntBASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 ESPNP-201ENST00000270691 2015 ntBASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 AL391825.1-201ENST00000457671 1364 ntBASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 AC107918.2-201ENST00000530817 355 ntBASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 WASH4P-201ENST00000564273 1246 ntBASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RSPO4Q2I0M5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 AL109936.8-201ENST00000641772 604 ntBASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RSPO4Q2I0M5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms