Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH1Q08174 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH1Q08174 AL589182.2-201ENST00000619332 1049 ntBASIC16.56■□□□□ 0.24
PCDH1Q08174 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDH1Q08174 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH1Q08174 AL356309.3-201ENST00000624132 1934 ntBASIC16.56■□□□□ 0.24
PCDH1Q08174 TNRC18P3-201ENST00000441896 2691 ntBASIC16.56■□□□□ 0.24
PCDH1Q08174 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH1Q08174 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH1Q08174 AC084018.2-201ENST00000613093 2607 ntBASIC16.56■□□□□ 0.24
PCDH1Q08174 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH1Q08174 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PCDH1Q08174 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDH1Q08174 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH1Q08174 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDH1Q08174 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDH1Q08174 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH1Q08174 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDH1Q08174 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.55■□□□□ 0.24
PCDH1Q08174 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDH1Q08174 AL590787.1-201ENST00000568856 1315 ntBASIC16.55■□□□□ 0.24
PCDH1Q08174 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH1Q08174 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH1Q08174 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDH1Q08174 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH1Q08174 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH1Q08174 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDH1Q08174 FGFR3P6-201ENST00000457012 610 ntBASIC16.55■□□□□ 0.24
PCDH1Q08174 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PCDH1Q08174 AC091304.2-201ENST00000564639 760 ntBASIC16.55■□□□□ 0.24
PCDH1Q08174 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH1Q08174 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH1Q08174 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PCDH1Q08174 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDH1Q08174 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH1Q08174 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH1Q08174 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH1Q08174 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDH1Q08174 NCF1C-201ENST00000438382 1427 ntBASIC16.54■□□□□ 0.24
PCDH1Q08174 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH1Q08174 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH1Q08174 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH1Q08174 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PCDH1Q08174 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH1Q08174 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH1Q08174 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH1Q08174 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH1Q08174 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDH1Q08174 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
PCDH1Q08174 AL732292.2-201ENST00000609649 430 ntBASIC16.54■□□□□ 0.24
PCDH1Q08174 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
PCDH1Q08174 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH1Q08174 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
PCDH1Q08174 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH1Q08174 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH1Q08174 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH1Q08174 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH1Q08174 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDH1Q08174 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms