Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.16■□□□□ 0.18
RPS3AP61247 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS3AP61247 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.16■□□□□ 0.18
RPS3AP61247 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.16■□□□□ 0.18
RPS3AP61247 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
RPS3AP61247 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS3AP61247 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPS3AP61247 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPS3AP61247 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS3AP61247 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS3AP61247 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPS3AP61247 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RPS3AP61247 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS3AP61247 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.16■□□□□ 0.18
RPS3AP61247 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.16■□□□□ 0.18
RPS3AP61247 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS3AP61247 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.16■□□□□ 0.18
RPS3AP61247 AC074051.2-201ENST00000565115 352 ntBASIC16.16■□□□□ 0.18
RPS3AP61247 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.16■□□□□ 0.18
RPS3AP61247 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.16■□□□□ 0.18
RPS3AP61247 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RPS3AP61247 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.16■□□□□ 0.18
RPS3AP61247 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS3AP61247 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RPS3AP61247 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS3AP61247 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.16■□□□□ 0.18
RPS3AP61247 AC093010.1-201ENST00000473625 1624 ntBASIC16.16■□□□□ 0.18
RPS3AP61247 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.15■□□□□ 0.18
RPS3AP61247 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 MTCL1P1-201ENST00000446207 792 ntBASIC16.15■□□□□ 0.18
RPS3AP61247 NUS1P1-201ENST00000446295 882 ntBASIC16.15■□□□□ 0.18
RPS3AP61247 KRT17P6-201ENST00000453795 1220 ntBASIC16.15■□□□□ 0.18
RPS3AP61247 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.15■□□□□ 0.18
RPS3AP61247 AC068472.1-201ENST00000474589 881 ntBASIC16.15■□□□□ 0.18
RPS3AP61247 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.15■□□□□ 0.18
RPS3AP61247 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RPS3AP61247 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.15■□□□□ 0.18
RPS3AP61247 CLEC4GP1-201ENST00000596555 870 ntBASIC16.15■□□□□ 0.18
RPS3AP61247 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 AC026691.1-201ENST00000602502 2017 ntBASIC16.15■□□□□ 0.18
RPS3AP61247 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.15■□□□□ 0.18
RPS3AP61247 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.15■□□□□ 0.18
RPS3AP61247 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.15■□□□□ 0.18
RPS3AP61247 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS3AP61247 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS3AP61247 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
RPS3AP61247 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RPS3AP61247 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RPS3AP61247 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS3AP61247 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS3AP61247 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS3AP61247 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RPS3AP61247 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.14■□□□□ 0.17
RPS3AP61247 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS3AP61247 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS3AP61247 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS3AP61247 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS3AP61247 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS3AP61247 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS3AP61247 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS3AP61247 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.14■□□□□ 0.17
RPS3AP61247 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS3AP61247 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RPS3AP61247 MINOS1P3-201ENST00000457048 203 ntBASIC16.14■□□□□ 0.17
RPS3AP61247 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RPS3AP61247 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS3AP61247 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS3AP61247 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.14■□□□□ 0.17
RPS3AP61247 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
RPS3AP61247 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms