Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CKS1BP61024 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.1□□□□□ -0.47
CKS1BP61024 MFAP1P1-201ENST00000442257 1255 ntBASIC12.1□□□□□ -0.47
CKS1BP61024 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.1□□□□□ -0.47
CKS1BP61024 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.1□□□□□ -0.47
CKS1BP61024 KRT18P6-201ENST00000555540 1265 ntBASIC12.1□□□□□ -0.47
CKS1BP61024 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.1□□□□□ -0.47
CKS1BP61024 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.1□□□□□ -0.47
CKS1BP61024 DGCR10-201ENST00000609839 495 ntBASIC12.1□□□□□ -0.47
CKS1BP61024 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CKS1BP61024 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CKS1BP61024 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CKS1BP61024 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.1□□□□□ -0.47
CKS1BP61024 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CKS1BP61024 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.1□□□□□ -0.47
CKS1BP61024 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CKS1BP61024 KRT8P7-201ENST00000533003 1432 ntBASIC12.1□□□□□ -0.47
CKS1BP61024 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.1□□□□□ -0.47
CKS1BP61024 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.1□□□□□ -0.47
CKS1BP61024 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 SDHAP2-201ENST00000455183 2001 ntBASIC12.1□□□□□ -0.47
CKS1BP61024 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.1□□□□□ -0.47
CKS1BP61024 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CKS1BP61024 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 PCDHA14-201ENST00000506751 2298 ntBASIC12.09□□□□□ -0.47
CKS1BP61024 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CKS1BP61024 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 AC096733.2-201ENST00000609937 1394 ntBASIC12.09□□□□□ -0.47
CKS1BP61024 AC126335.2-201ENST00000623362 4637 ntBASIC12.09□□□□□ -0.47
CKS1BP61024 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.09□□□□□ -0.47
CKS1BP61024 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.09□□□□□ -0.47
CKS1BP61024 CA15P1-201ENST00000481698 905 ntBASIC12.09□□□□□ -0.47
CKS1BP61024 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.09□□□□□ -0.47
CKS1BP61024 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.09□□□□□ -0.47
CKS1BP61024 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 AC079781.5-202ENST00000641784 3743 ntBASIC12.09□□□□□ -0.47
CKS1BP61024 PTENP1-202ENST00000532280 3996 ntBASIC12.09□□□□□ -0.47
CKS1BP61024 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 CR383656.2-201ENST00000548656 2254 ntBASIC12.09□□□□□ -0.47
CKS1BP61024 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CKS1BP61024 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CKS1BP61024 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CKS1BP61024 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.09□□□□□ -0.47
CKS1BP61024 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CKS1BP61024 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.09□□□□□ -0.47
CKS1BP61024 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CKS1BP61024 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
CKS1BP61024 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
CKS1BP61024 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CKS1BP61024 AC104640.1-201ENST00000562617 2109 ntBASIC12.08□□□□□ -0.47
CKS1BP61024 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 AC015656.1-201ENST00000624209 3578 ntBASIC12.08□□□□□ -0.48
CKS1BP61024 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS1BP61024 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms