Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
MCCD1P59942 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.29■□□□□ 0.52
MCCD1P59942 MRPL20P1-201ENST00000400819 433 ntBASIC18.29■□□□□ 0.52
MCCD1P59942 PMS2P1-201ENST00000431037 1228 ntBASIC18.29■□□□□ 0.52
MCCD1P59942 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.29■□□□□ 0.52
MCCD1P59942 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.29■□□□□ 0.52
MCCD1P59942 ACTL9-202ENST00000612068 1252 ntBASIC18.29■□□□□ 0.52
MCCD1P59942 AC010654.1-201ENST00000615722 808 ntBASIC18.29■□□□□ 0.52
MCCD1P59942 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.29■□□□□ 0.52
MCCD1P59942 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
MCCD1P59942 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
MCCD1P59942 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MCCD1P59942 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.29■□□□□ 0.52
MCCD1P59942 HLA-A-202ENST00000376806 1854 ntBASIC18.29■□□□□ 0.52
MCCD1P59942 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MCCD1P59942 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
MCCD1P59942 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.28■□□□□ 0.52
MCCD1P59942 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MCCD1P59942 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
MCCD1P59942 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MCCD1P59942 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.28■□□□□ 0.52
MCCD1P59942 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MCCD1P59942 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.28■□□□□ 0.52
MCCD1P59942 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MCCD1P59942 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
MCCD1P59942 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.28■□□□□ 0.52
MCCD1P59942 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.28■□□□□ 0.52
MCCD1P59942 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.28■□□□□ 0.52
MCCD1P59942 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
MCCD1P59942 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.28■□□□□ 0.52
MCCD1P59942 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MCCD1P59942 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MCCD1P59942 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MCCD1P59942 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
MCCD1P59942 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.28■□□□□ 0.52
MCCD1P59942 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
MCCD1P59942 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.27■□□□□ 0.52
MCCD1P59942 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.27■□□□□ 0.52
MCCD1P59942 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.27■□□□□ 0.52
MCCD1P59942 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 AC131009.4-201ENST00000624048 1740 ntBASIC18.27■□□□□ 0.52
MCCD1P59942 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.27■□□□□ 0.52
MCCD1P59942 KRT8P39-201ENST00000396270 1433 ntBASIC18.27■□□□□ 0.52
MCCD1P59942 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
MCCD1P59942 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.27■□□□□ 0.52
MCCD1P59942 RHOQP3-201ENST00000437982 621 ntBASIC18.27■□□□□ 0.52
MCCD1P59942 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.27■□□□□ 0.52
MCCD1P59942 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
MCCD1P59942 AC092910.1-201ENST00000482027 1129 ntBASIC18.27■□□□□ 0.52
MCCD1P59942 RNA5SP415-201ENST00000517246 115 ntBASIC18.27■□□□□ 0.52
MCCD1P59942 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.27■□□□□ 0.52
MCCD1P59942 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.27■□□□□ 0.52
MCCD1P59942 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.27■□□□□ 0.52
MCCD1P59942 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MCCD1P59942 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MCCD1P59942 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MCCD1P59942 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MCCD1P59942 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
MCCD1P59942 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.27■□□□□ 0.51
MCCD1P59942 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MCCD1P59942 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MCCD1P59942 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.26■□□□□ 0.51
MCCD1P59942 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MCCD1P59942 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MCCD1P59942 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.26■□□□□ 0.51
MCCD1P59942 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.26■□□□□ 0.51
MCCD1P59942 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MCCD1P59942 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
MCCD1P59942 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.26■□□□□ 0.51
MCCD1P59942 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.26■□□□□ 0.51
MCCD1P59942 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MCCD1P59942 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MCCD1P59942 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MCCD1P59942 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MCCD1P59942 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
MCCD1P59942 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
MCCD1P59942 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MCCD1P59942 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
MCCD1P59942 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.26■□□□□ 0.51
MCCD1P59942 IGLL3P-201ENST00000412472 434 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms