Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.8□□□□□ -0.2
PAX9P55771 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.8□□□□□ -0.2
PAX9P55771 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.8□□□□□ -0.2
PAX9P55771 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.8□□□□□ -0.2
PAX9P55771 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.8□□□□□ -0.2
PAX9P55771 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.8□□□□□ -0.2
PAX9P55771 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.8□□□□□ -0.2
PAX9P55771 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
PAX9P55771 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.8□□□□□ -0.2
PAX9P55771 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.8□□□□□ -0.2
PAX9P55771 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PAX9P55771 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.8□□□□□ -0.2
PAX9P55771 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
PAX9P55771 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PAX9P55771 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PAX9P55771 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
PAX9P55771 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.79□□□□□ -0.2
PAX9P55771 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.79□□□□□ -0.2
PAX9P55771 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.79□□□□□ -0.2
PAX9P55771 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.79□□□□□ -0.2
PAX9P55771 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.79□□□□□ -0.2
PAX9P55771 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.79□□□□□ -0.2
PAX9P55771 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PAX9P55771 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PAX9P55771 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PAX9P55771 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.79□□□□□ -0.2
PAX9P55771 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.79□□□□□ -0.2
PAX9P55771 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.78□□□□□ -0.2
PAX9P55771 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PAX9P55771 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.78□□□□□ -0.2
PAX9P55771 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PAX9P55771 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.78□□□□□ -0.2
PAX9P55771 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PAX9P55771 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PAX9P55771 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.78□□□□□ -0.2
PAX9P55771 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms