Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
APOC4P55056 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
APOC4P55056 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
APOC4P55056 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC4P55056 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
APOC4P55056 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
APOC4P55056 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
APOC4P55056 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC4P55056 HCG4B-203ENST00000450128 991 ntBASIC12.57□□□□□ -0.4
APOC4P55056 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.57□□□□□ -0.4
APOC4P55056 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.57□□□□□ -0.4
APOC4P55056 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC4P55056 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC4P55056 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
APOC4P55056 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC4P55056 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
APOC4P55056 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC4P55056 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC4P55056 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC4P55056 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
APOC4P55056 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC4P55056 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 AC129492.6-201ENST00000611383 1305 ntBASIC12.57□□□□□ -0.4
APOC4P55056 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 NOC2LP1-202ENST00000452600 2235 ntBASIC12.57□□□□□ -0.4
APOC4P55056 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
APOC4P55056 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 AC008764.6-201ENST00000595909 2069 ntBASIC12.57□□□□□ -0.4
APOC4P55056 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
APOC4P55056 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
APOC4P55056 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.56□□□□□ -0.4
APOC4P55056 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
APOC4P55056 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.56□□□□□ -0.4
APOC4P55056 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.56□□□□□ -0.4
APOC4P55056 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.56□□□□□ -0.4
APOC4P55056 AC096734.2-201ENST00000562054 433 ntBASIC12.56□□□□□ -0.4
APOC4P55056 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.56□□□□□ -0.4
APOC4P55056 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
APOC4P55056 AC079781.4-201ENST00000641908 219 ntBASIC12.56□□□□□ -0.4
APOC4P55056 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.56□□□□□ -0.4
APOC4P55056 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.56□□□□□ -0.4
APOC4P55056 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
APOC4P55056 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
APOC4P55056 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.56□□□□□ -0.4
APOC4P55056 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.56□□□□□ -0.4
APOC4P55056 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
APOC4P55056 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOC4P55056 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC4P55056 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC4P55056 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
APOC4P55056 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC4P55056 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
APOC4P55056 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC4P55056 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
APOC4P55056 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
APOC4P55056 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC4P55056 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
APOC4P55056 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC4P55056 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOC4P55056 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC4P55056 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOC4P55056 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.55□□□□□ -0.4
APOC4P55056 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
APOC4P55056 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
APOC4P55056 AC023274.1-201ENST00000418278 595 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms