Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.89■□□□□ 0.61
CPT1AP50416 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.89■□□□□ 0.61
CPT1AP50416 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CPT1AP50416 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.89■□□□□ 0.61
CPT1AP50416 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.89■□□□□ 0.61
CPT1AP50416 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.89■□□□□ 0.61
CPT1AP50416 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CPT1AP50416 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CPT1AP50416 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.88■□□□□ 0.61
CPT1AP50416 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.88■□□□□ 0.61
CPT1AP50416 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.88■□□□□ 0.61
CPT1AP50416 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 RNU1-129P-201ENST00000384064 167 ntBASIC18.88■□□□□ 0.61
CPT1AP50416 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPT1AP50416 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CPT1AP50416 AC026150.2-201ENST00000564693 1156 ntBASIC18.88■□□□□ 0.61
CPT1AP50416 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.88■□□□□ 0.61
CPT1AP50416 U1.21-201ENST00000580816 167 ntBASIC18.88■□□□□ 0.61
CPT1AP50416 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.88■□□□□ 0.61
CPT1AP50416 AL031055.1-201ENST00000606362 631 ntBASIC18.88■□□□□ 0.61
CPT1AP50416 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.88■□□□□ 0.61
CPT1AP50416 AP001350.2-201ENST00000625104 1094 ntBASIC18.88■□□□□ 0.61
CPT1AP50416 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.88■□□□□ 0.61
CPT1AP50416 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPT1AP50416 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPT1AP50416 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.88■□□□□ 0.61
CPT1AP50416 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.88■□□□□ 0.61
CPT1AP50416 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPT1AP50416 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.88■□□□□ 0.61
CPT1AP50416 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPT1AP50416 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.88■□□□□ 0.61
CPT1AP50416 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPT1AP50416 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPT1AP50416 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPT1AP50416 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPT1AP50416 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPT1AP50416 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPT1AP50416 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.87■□□□□ 0.61
CPT1AP50416 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPT1AP50416 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPT1AP50416 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.87■□□□□ 0.61
CPT1AP50416 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.87■□□□□ 0.61
CPT1AP50416 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.87■□□□□ 0.61
CPT1AP50416 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPT1AP50416 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.87■□□□□ 0.61
CPT1AP50416 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.87■□□□□ 0.61
CPT1AP50416 AC087641.1-201ENST00000557561 1021 ntBASIC18.87■□□□□ 0.61
CPT1AP50416 AC140878.1-201ENST00000565277 250 ntBASIC18.87■□□□□ 0.61
CPT1AP50416 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CPT1AP50416 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPT1AP50416 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.87■□□□□ 0.61
CPT1AP50416 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.87■□□□□ 0.61
CPT1AP50416 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.87■□□□□ 0.61
CPT1AP50416 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.87■□□□□ 0.61
CPT1AP50416 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPT1AP50416 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPT1AP50416 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CPT1AP50416 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.86■□□□□ 0.61
CPT1AP50416 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.86■□□□□ 0.61
CPT1AP50416 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.86■□□□□ 0.61
CPT1AP50416 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.86■□□□□ 0.61
CPT1AP50416 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.86■□□□□ 0.61
CPT1AP50416 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.86■□□□□ 0.61
CPT1AP50416 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.86■□□□□ 0.61
CPT1AP50416 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.86■□□□□ 0.61
CPT1AP50416 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.86■□□□□ 0.61
CPT1AP50416 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.86■□□□□ 0.61
CPT1AP50416 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.86■□□□□ 0.61
CPT1AP50416 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CPT1AP50416 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPT1AP50416 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms