Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 VENTXP7-201ENST00000475503 772 ntBASIC10.94□□□□□ -0.66
UBE2AP49459 DUX4L26-201ENST00000489078 1255 ntBASIC10.94□□□□□ -0.66
UBE2AP49459 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2AP49459 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2AP49459 AL390719.2-201ENST00000606993 987 ntBASIC10.94□□□□□ -0.66
UBE2AP49459 IGHV3-41-201ENST00000613121 348 ntBASIC10.94□□□□□ -0.66
UBE2AP49459 HARS-201ENST00000307633 1780 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2AP49459 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2AP49459 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 PCDHA3-202ENST00000532566 4594 ntBASIC10.94□□□□□ -0.66
UBE2AP49459 AC008894.3-201ENST00000624324 3103 ntBASIC10.94□□□□□ -0.66
UBE2AP49459 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2AP49459 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2AP49459 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2AP49459 AL645608.8-201ENST00000606034 2086 ntBASIC10.94□□□□□ -0.66
UBE2AP49459 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
UBE2AP49459 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 LINC00304-203ENST00000565008 1864 ntBASIC10.93□□□□□ -0.66
UBE2AP49459 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2AP49459 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
UBE2AP49459 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2AP49459 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2AP49459 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 DAP-202ENST00000432074 1048 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 AC104076.2-201ENST00000448912 469 ntBASIC10.93□□□□□ -0.66
UBE2AP49459 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 LY6E-213ENST00000522528 606 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2AP49459 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2AP49459 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2AP49459 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2AP49459 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
UBE2AP49459 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2AP49459 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
UBE2AP49459 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
UBE2AP49459 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2AP49459 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
UBE2AP49459 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC10.92□□□□□ -0.66
UBE2AP49459 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
UBE2AP49459 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2AP49459 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.92□□□□□ -0.66
UBE2AP49459 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC10.92□□□□□ -0.66
UBE2AP49459 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2AP49459 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
UBE2AP49459 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2AP49459 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 BOC-212ENST00000485230 2173 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2AP49459 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC10.92□□□□□ -0.66
UBE2AP49459 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 TSPY22P-201ENST00000427496 604 ntBASIC10.92□□□□□ -0.66
UBE2AP49459 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2AP49459 AC068472.1-201ENST00000474589 881 ntBASIC10.92□□□□□ -0.66
UBE2AP49459 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2AP49459 KRT18P21-201ENST00000515767 1272 ntBASIC10.92□□□□□ -0.66
UBE2AP49459 IGHV3-52-201ENST00000519770 353 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms