Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.29■□□□□ 0.04
SRP9P49458 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.29■□□□□ 0.04
SRP9P49458 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRP9P49458 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SRP9P49458 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SRP9P49458 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.29■□□□□ 0.04
SRP9P49458 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.28■□□□□ 0.04
SRP9P49458 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.28■□□□□ 0.04
SRP9P49458 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 UPK3BP1-201ENST00000428678 509 ntBASIC15.28■□□□□ 0.04
SRP9P49458 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 VENTXP7-201ENST00000475503 772 ntBASIC15.28■□□□□ 0.04
SRP9P49458 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.28■□□□□ 0.04
SRP9P49458 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.28■□□□□ 0.04
SRP9P49458 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SRP9P49458 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SRP9P49458 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.28■□□□□ 0.04
SRP9P49458 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.28■□□□□ 0.04
SRP9P49458 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRP9P49458 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRP9P49458 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SRP9P49458 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 AC016734.2-201ENST00000624325 1377 ntBASIC15.27■□□□□ 0.04
SRP9P49458 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.27■□□□□ 0.04
SRP9P49458 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SRP9P49458 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.27■□□□□ 0.04
SRP9P49458 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.27■□□□□ 0.04
SRP9P49458 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.27■□□□□ 0.04
SRP9P49458 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.27■□□□□ 0.04
SRP9P49458 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.27■□□□□ 0.04
SRP9P49458 AC124864.1-201ENST00000623408 392 ntBASIC15.27■□□□□ 0.04
SRP9P49458 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRP9P49458 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SRP9P49458 AC132938.6-201ENST00000623828 1655 ntBASIC15.27■□□□□ 0.03
SRP9P49458 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRP9P49458 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.03
SRP9P49458 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRP9P49458 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.27■□□□□ 0.03
SRP9P49458 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRP9P49458 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.27■□□□□ 0.03
SRP9P49458 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.27■□□□□ 0.03
SRP9P49458 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SRP9P49458 AC092171.3-201ENST00000610122 2651 ntBASIC15.27■□□□□ 0.03
SRP9P49458 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRP9P49458 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SRP9P49458 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.27■□□□□ 0.03
SRP9P49458 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRP9P49458 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms