Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.12■□□□□ 0.65
CENPFP49454 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CENPFP49454 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CENPFP49454 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.12■□□□□ 0.65
CENPFP49454 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CENPFP49454 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CENPFP49454 ANKRD19P-201ENST00000338192 862 ntBASIC19.12■□□□□ 0.65
CENPFP49454 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.12■□□□□ 0.65
CENPFP49454 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CENPFP49454 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.12■□□□□ 0.65
CENPFP49454 AC012569.1-201ENST00000591191 1524 ntBASIC19.12■□□□□ 0.65
CENPFP49454 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.12■□□□□ 0.65
CENPFP49454 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.12■□□□□ 0.65
CENPFP49454 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CENPFP49454 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.12■□□□□ 0.65
CENPFP49454 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.12■□□□□ 0.65
CENPFP49454 AC009113.1-201ENST00000570267 2443 ntBASIC19.12■□□□□ 0.65
CENPFP49454 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CENPFP49454 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CENPFP49454 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.12■□□□□ 0.65
CENPFP49454 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CENPFP49454 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CENPFP49454 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CENPFP49454 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CENPFP49454 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CENPFP49454 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CENPFP49454 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CENPFP49454 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CENPFP49454 AC046185.3-201ENST00000623228 1824 ntBASIC19.11■□□□□ 0.65
CENPFP49454 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CENPFP49454 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CENPFP49454 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CENPFP49454 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CENPFP49454 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CENPFP49454 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.11■□□□□ 0.65
CENPFP49454 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.11■□□□□ 0.65
CENPFP49454 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CENPFP49454 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.11■□□□□ 0.65
CENPFP49454 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CENPFP49454 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CENPFP49454 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.11■□□□□ 0.65
CENPFP49454 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CENPFP49454 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CENPFP49454 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CENPFP49454 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.1■□□□□ 0.65
CENPFP49454 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.1■□□□□ 0.65
CENPFP49454 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
CENPFP49454 WASH4P-201ENST00000564273 1246 ntBASIC19.1■□□□□ 0.65
CENPFP49454 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.1■□□□□ 0.65
CENPFP49454 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.1■□□□□ 0.65
CENPFP49454 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CENPFP49454 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CENPFP49454 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CENPFP49454 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.1■□□□□ 0.65
CENPFP49454 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
CENPFP49454 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CENPFP49454 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CENPFP49454 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CENPFP49454 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.1■□□□□ 0.65
CENPFP49454 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.1■□□□□ 0.65
CENPFP49454 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CENPFP49454 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CENPFP49454 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.1■□□□□ 0.65
CENPFP49454 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CENPFP49454 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CENPFP49454 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CENPFP49454 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.1■□□□□ 0.65
CENPFP49454 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.1■□□□□ 0.65
CENPFP49454 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CENPFP49454 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CENPFP49454 FAM8A2P-201ENST00000528813 1142 ntBASIC19.1■□□□□ 0.65
CENPFP49454 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.1■□□□□ 0.65
CENPFP49454 AC008267.7-201ENST00000624570 1194 ntBASIC19.1■□□□□ 0.65
CENPFP49454 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 AC016027.1-202ENST00000607927 1699 ntBASIC19.09■□□□□ 0.65
CENPFP49454 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CENPFP49454 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.09■□□□□ 0.65
CENPFP49454 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.09■□□□□ 0.65
CENPFP49454 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.09■□□□□ 0.65
CENPFP49454 AL138918.1-201ENST00000568306 659 ntBASIC19.09■□□□□ 0.65
CENPFP49454 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.09■□□□□ 0.65
CENPFP49454 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 AC008735.3-201ENST00000596646 500 ntBASIC19.09■□□□□ 0.65
CENPFP49454 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CENPFP49454 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.09■□□□□ 0.65
CENPFP49454 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.09■□□□□ 0.65
CENPFP49454 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CENPFP49454 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.09■□□□□ 0.65
CENPFP49454 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.09■□□□□ 0.65
CENPFP49454 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms