Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFX5P48382 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.93■□□□□ 0.94
RFX5P48382 AL691403.2-201ENST00000618460 490 ntBASIC20.93■□□□□ 0.94
RFX5P48382 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.93■□□□□ 0.94
RFX5P48382 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
RFX5P48382 AC020763.4-201ENST00000623414 4170 ntBASIC20.93■□□□□ 0.94
RFX5P48382 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX5P48382 LETM1P2-201ENST00000597330 2178 ntBASIC20.93■□□□□ 0.94
RFX5P48382 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX5P48382 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX5P48382 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.93■□□□□ 0.94
RFX5P48382 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX5P48382 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.93■□□□□ 0.94
RFX5P48382 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RFX5P48382 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RFX5P48382 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.92■□□□□ 0.94
RFX5P48382 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.92■□□□□ 0.94
RFX5P48382 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 AP006288.1-201ENST00000446065 395 ntBASIC20.92■□□□□ 0.94
RFX5P48382 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.92■□□□□ 0.94
RFX5P48382 AC004967.1-201ENST00000453589 447 ntBASIC20.92■□□□□ 0.94
RFX5P48382 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.92■□□□□ 0.94
RFX5P48382 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.92■□□□□ 0.94
RFX5P48382 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.92■□□□□ 0.94
RFX5P48382 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.92■□□□□ 0.94
RFX5P48382 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.92■□□□□ 0.94
RFX5P48382 AC012569.1-201ENST00000591191 1524 ntBASIC20.92■□□□□ 0.94
RFX5P48382 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.92■□□□□ 0.94
RFX5P48382 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.92■□□□□ 0.94
RFX5P48382 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.92■□□□□ 0.94
RFX5P48382 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX5P48382 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX5P48382 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX5P48382 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX5P48382 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX5P48382 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RFX5P48382 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RFX5P48382 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.91■□□□□ 0.94
RFX5P48382 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
RFX5P48382 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFX5P48382 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.91■□□□□ 0.94
RFX5P48382 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX5P48382 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.91■□□□□ 0.94
RFX5P48382 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.91■□□□□ 0.94
RFX5P48382 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.91■□□□□ 0.94
RFX5P48382 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFX5P48382 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.91■□□□□ 0.94
RFX5P48382 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.91■□□□□ 0.94
RFX5P48382 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.91■□□□□ 0.94
RFX5P48382 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFX5P48382 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.9■□□□□ 0.94
RFX5P48382 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX5P48382 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFX5P48382 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.9■□□□□ 0.94
RFX5P48382 AC131009.4-201ENST00000624048 1740 ntBASIC20.9■□□□□ 0.94
RFX5P48382 AL121761.2-201ENST00000598007 1648 ntBASIC20.9■□□□□ 0.94
RFX5P48382 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFX5P48382 AL021920.2-201ENST00000624828 1351 ntBASIC20.9■□□□□ 0.94
RFX5P48382 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RFX5P48382 AC211486.1-202ENST00000416371 468 ntBASIC20.9■□□□□ 0.94
RFX5P48382 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
RFX5P48382 AC211476.1-201ENST00000503899 468 ntBASIC20.9■□□□□ 0.94
RFX5P48382 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.9■□□□□ 0.94
RFX5P48382 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RFX5P48382 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.9■□□□□ 0.94
RFX5P48382 AP001160.2-201ENST00000596071 487 ntBASIC20.9■□□□□ 0.94
RFX5P48382 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.9■□□□□ 0.94
RFX5P48382 PCDHB17P-201ENST00000539533 2393 ntBASIC20.9■□□□□ 0.94
RFX5P48382 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.9■□□□□ 0.94
RFX5P48382 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX5P48382 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RFX5P48382 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX5P48382 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX5P48382 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFX5P48382 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RFX5P48382 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX5P48382 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX5P48382 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX5P48382 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX5P48382 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
RFX5P48382 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFX5P48382 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RFX5P48382 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.89■□□□□ 0.93
RFX5P48382 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFX5P48382 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFX5P48382 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms